Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015846200.1_cds_XP_016509546.1_22469
CDS Infomation

[gene=LOC107827008] [db_xref=GeneID:107827008] [protein=protein JASON-like] [protein_id=XP_016509546.1] [location=join(39309..39512,40179..40230,40342..40439,41591..41832,42263..43079,43164..43246,43475..43553)] [gbkey=CDS]
Sequence

ATGGTGTGGTCGTGGATAGTGATCGGAGATTGTGATCAATCGAACAATTCTAACCCTAAC
GCCGTGATTACGGTGGTTCGTGCGATGGTTGCGGCGGTCATGGGCTGTCTCTTCGGCTGT
TTCAAGATCAAGGATGTTACGGGTCCTAATGTTCCTTGTAATGCTCCACAATCGAATCGA
ATCTCGCAATCTACTCCTACTAAGGAACCTTTGGTGTCTCGCAATAGAAGTCCACTATCT
TCACTTTTAACTGAAGATAAAGATGAGACCAACACTTTGGGCTGCGAAGAAATGGAGAAT
CAGAGTTCGGATACACCTATCACACAATTGGACACAAATGATCTTAGGAATCAGGCCAAG
TTTCTCAAAGCTTGTGGAACCTTACCTGAGACCCCTGCAGAAATTCGAAACTGCTCGGTG
AAATGCCAAAACCTGTCTGCTCCAGTGGAAGAAGTTGAACCTTTAAAATTCAATTCCTGG
CCCTCTGATGCAACATTTCAGAAGCTCATCTCTAATTCGCAACCTGATCAGCTCACACCT
ATCAGAACCAATGGAGTAAACAAGCAATCTGGTTCGTTGGTGCATACGCCTAGCAGTTGT
TTGACTGATGGACAAAGTGGTCAAAGTTTCTCTAAGAACTCCATTGATGGCAGTGGCGAT
TCTAACACTCCGATATTCACCAAGGTTAATGCTAATCTGGCTCTTAATGATAACACGGCT
TCAGCAGCTTTACCAGTCACTGCTCCAGCTTCCCAGTACAGATACAGATCTGTCCATTTC
GAAAGCGAGTCAGATCTGTCTTCTGTGTCATCAAAATGTATTTCATCTGAAACCAGTCAA
AGTTCCGCACTGTCTGAATCACCAGGCAACTATCATGCATCAAAGTATTCACCCTATCCA
ACCCCATTAAAGCTAACTGATGAGATGCAAACGCCTGGAACCTTTTTTCCAGCATATTTG
GACCACATGGGAATTGCTAAAACTGGACGGATCAGGTCTCAGTTTGTGTATCCTGTTTTA
AACCCTGTGGATAATGCGTCACAGTTGAAGGAATTGTTAAATGAAGATTCTTACTCCACT
CAAGATTCCAATTCTAGATTATTGTCCAGCCACACGACAGATTTTGATCAAAGGCCTGAT
GAAGCAAACCTTATATCAGACCTAGGAATATTCGGATTCACAGAAACTTCAGTTGATAAA
GATTCAAAACCACTTACAATCAATCAGGTGCAGAGTAAGCAGCATCTTGGTTCTGTTTAT
GGTGGTGAAAATGTTCATTATAGTAAAACTCCTGGAGATAGACCTATTATTGGGTTGGTT
GCTGCTCATTGGAATGATGATGAAACTTCTCGTATATCACCTAAATGGTGGGATGGAAAT
GGGATTCCAAATTCTACTAACAAGTACAAAGAGGATCAAAAAGTTAGTTGGCATGCAACA
CCGTTTGAGGAGAGACTGGAGAAGGCATTGTCACAAGAAACTAATATTCCACAAAGGACG
CAACTCAGTGAGACGCTACCAATTGCTTTAGGTGAAACTGAGGAACCAGATACTGCTATA
TCCCAAAAGCACTGA

Peptide Sequence

PEP ID

XP_016509546.1
PEP Infomation

PREDICTED: protein JASON-like [Nicotiana tabacum]
Sequence

MVWSWIVIGDCDQSNNSNPNAVITVVRAMVAAVMGCLFGCFKIKDVTGPNVPCNAPQSNR
ISQSTPTKEPLVSRNRSPLSSLLTEDKDETNTLGCEEMENQSSDTPITQLDTNDLRNQAK
FLKACGTLPETPAEIRNCSVKCQNLSAPVEEVEPLKFNSWPSDATFQKLISNSQPDQLTP
IRTNGVNKQSGSLVHTPSSCLTDGQSGQSFSKNSIDGSGDSNTPIFTKVNANLALNDNTA
SAALPVTAPASQYRYRSVHFESESDLSSVSSKCISSETSQSSALSESPGNYHASKYSPYP
TPLKLTDEMQTPGTFFPAYLDHMGIAKTGRIRSQFVYPVLNPVDNASQLKELLNEDSYST
QDSNSRLLSSHTTDFDQRPDEANLISDLGIFGFTETSVDKDSKPLTINQVQSKQHLGSVY
GGENVHYSKTPGDRPIIGLVAAHWNDDETSRISPKWWDGNGIPNSTNKYKEDQKVSWHAT
PFEERLEKALSQETNIPQRTQLSETLPIALGETEEPDTAISQKH

Transcript Sequence

Gene sequence data has not been registered.